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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891276.1_cds_XP_016446049.1_40945
CDS Infomation

[gene=LOC107771219] [db_xref=GeneID:107771219] [protein=coiled-coil domain-containing protein SCD2-like] [protein_id=XP_016446049.1] [location=complement(join(47012..47142,49700..49826,50293..50333,50868..50909,51403..51469,51561..51679,51802..51915,53115..53175,53286..53396,53528..53602,53845..53872,53951..54000,54270..54332,54431..54472,54639..54714,55657..55847,56438..56806))] [gbkey=CDS]
Sequence

ATGGATCGGCGGAGGACGGGAAGTCCGGTGTACGCTCGGCAGTGGAGTGGAGGATCAAGC
AGCACGGGTTCATCTTCGCCGGCGGGATCTCCGGCTCATCCCCGTGCTCGGTTGCCTCCT
ACGGTGACAGGCATGTCTACTATAAAGAGGACTCAGAATGTCGCCGCCAAAGCTGCTGCT
CAGCGTTTGGCACAAGTCATGGCTTCTTCTCAGCCGCCTCCTGATGACGACGAGGATGAT
GATGATCTAGGGTTTCGGCGTCCTACAGCTGCTTTATCCACTAACGACCGTAGGAGTAAT
AGCAACAACAGGAGCAGTGGTTTGGCAGCTATTTCACTAGCCAAGCCTAATAGATCTCCT
TCCCCCGCGTTAGGTCGGAACTTTATGGATCACACTCCTTCTGTTCGTTCATCGTCAACT
GGAAGAGCCTCGATGTCTGTTCGTACGTCAGTAGCAACAACAACAACCGGAGCAATAGTG
CCGCCAAGTAGGTCATCATTGAGAACTCCAGTTTCCATACCGCCAGTAGAACCTCCTAGT
AGTCGCTTGAGAGAGAAAAGGTTCACACCAGAATTAGGACGCATTGATTTGAAGGGTTCA
GGAAATGAGCACGAGGCTTCTGCGCTTCGTGATGAGCTTGATATGCTTCAAGAAGAAAAC
GATGTTATTTTAGATAAGCTACGTCATACAGAAGAACAACGCGAAGAAGCTGAAGCTAGG
GTTCGTTTGTTGGAGAAACAGGTTGCTTCTCTTGGAGAAGGACTATCACTTGAAGCCAAA
TTATTAAGCAGGAAGCAAGAAGCACTTCGCCAGAGAGAGGCTGCTCTTAAAGCTGCACAG
CAAACTAAGGATGGAAGAGATGAAGAAATTACAATACTTCGTACTGAAATTGAAAACTTG
AAGGACGACACTGCGAATGCAATGGAACAACTTCAGGAAGCTGAATCTGAAGCAAAAGCT
CTTCGAACAATGACACAGAGAATGATTTTGACCCATGAAGAGATGGAGGAGGTGGTTCTA
AAGAGATGTTGGCTATCTCGATATTGGGGCCTAGCTGTACACTATGGTATCTGTGCAGAT
ATAGCAGGGGCAAAGCATGAGCATTGGTCATCTTTTGCACCTCTTCCATTTGAAGTTGTG
ATTTCTGCTGGGCAGAAGGCCAGGGAGGAATCCTGGAGTGGTGGCGATGATTCTGATCGG
AGCAAACGTGTTCGCGACATTAGTGACTTATCTGGAGAGGGAAATATTGAGAGTATGCTG
TCAGTTGAAATGGCTCTAAGAGAATTAGCTTCCCTGAAGGTTGAGGATGCTGTTATTCTT
GCATTGGCACAGCCTCGGCGCTCAAATGTCGTCCGTCAATCCTCTGATCCTAAATCATCT
GTTGACCCCAAGTTGATGGATGCATATGAGTTGAGCCAAGAGGAGTCAGAAGATGTTCTT
TTCAAGGAGGCTTGGCTTACATACTTCTGGAGGAGAGCAAAAGTGCATTGTGTAGAAGAA
GATATTGCAGAAGAGAGGCTTCAGTTCTGGATTAGCCGTAGTGGGCAAACACCAACCACT
CATGATGCTGTTGATGTGGAAAGAGGTTTAATAGAATTGAGGAAGCTGGGGATTGAACAG
CAGCTGTGGGAAGCTTCTCGTAAAGAAATTGACCAACCTTCGGTTACTAATGGCAAAATG
ACTGCGGAGTCAGAGGCATCTCCATGA

Peptide Sequence

PEP ID

XP_016446049.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein SCD2-like [Nicotiana tabacum]
Sequence

MDRRRTGSPVYARQWSGGSSSTGSSSPAGSPAHPRARLPPTVTGMSTIKRTQNVAAKAAA
QRLAQVMASSQPPPDDDEDDDDLGFRRPTAALSTNDRRSNSNNRSSGLAAISLAKPNRSP
SPALGRNFMDHTPSVRSSSTGRASMSVRTSVATTTTGAIVPPSRSSLRTPVSIPPVEPPS
SRLREKRFTPELGRIDLKGSGNEHEASALRDELDMLQEENDVILDKLRHTEEQREEAEAR
VRLLEKQVASLGEGLSLEAKLLSRKQEALRQREAALKAAQQTKDGRDEEITILRTEIENL
KDDTANAMEQLQEAESEAKALRTMTQRMILTHEEMEEVVLKRCWLSRYWGLAVHYGICAD
IAGAKHEHWSSFAPLPFEVVISAGQKAREESWSGGDDSDRSKRVRDISDLSGEGNIESML
SVEMALRELASLKVEDAVILALAQPRRSNVVRQSSDPKSSVDPKLMDAYELSQEESEDVL
FKEAWLTYFWRRAKVHCVEEDIAEERLQFWISRSGQTPTTHDAVDVERGLIELRKLGIEQ
QLWEASRKEIDQPSVTNGKMTAESEASP

Transcript Sequence

Gene sequence data has not been registered.